Phases of Digestion and Absorption

1. Cephalic Phase

2. Oral Phase

3. Gastric Phase

4. Intestinal Phase

Summary Table

Phase Triggers / Mediators Key Secretions Major Functions
Cephalic Sight, smell, taste or thought of food; vagal activation Saliva (mucins, amylase, lysozyme); HCl; pepsinogen; gastrin; minor pancreatic juice Primes GI tract; initiates salivary and gastric secretions
Oral Mastication and saliva mixing Salivary amylase; lingual lipase; mucins; immunoglobulins; lysozyme Begins starch and fat digestion; bolus formation and lubrication
Gastric Gastric distension; peptides; pH changes; vagal and gastrin signaling HCl; pepsin; gastric lipase; mucus and bicarbonate Protein hydrolysis; initial lipid digestion; controls chyme release to duodenum
Intestinal Duodenal acidification; fats; hyperosmolarity; enterogastric reflex; secretin; CCK; GIP/GLP-1 Pancreatic enzymes; bile salts; brush-border enzymes Completes digestion; absorbs nutrients; regulates upstream processes

Digestion and Absorption: Gastric Emptying and Intestinal Processes

Gastric Emptying

Gastric Factors

Duodenal Factors

Effects of Chyme in the Duodenum

Intestinal Conservation and Recycling

Fat Digestion and Absorption

A. Overview

B. Fat Digestion

C. Fat Absorption

D. Intracellular Processing and Lipoprotein Assembly

E. Disorders of Fat Absorption

Summary Table

Stage Location Key Enzymes Optimum pH % of Lipolysis
Gastric Stomach Gastric lipase; lingual lipase ~4.5 20%–30%
Intestinal Duodenum Pancreatic lipase; colipase; phospholipase A2; cholesterol esterase >6.5 70%–80%
Emulsification Duodenum Bile salts; phospholipids N/A Essential for micelle formation
Absorption Jejunum CD36; FATP4; FABP; acyl-CoA synthetase N/A N/A

Stages of Fat Digestion and Absorption

Stage of Fat Digestion/Absorption Defect Clinical Condition Findings Diagnosis
Emulsification/formation of micelles Defect in fatty acid ionization Hyperacidity (Zollinger-Ellison syndrome) Gastrinomas in pancreas or duodenum; ↑ serum gastrin Zollinger-Ellison syndrome
Hydrolysis Deficiency of pancreatic lipase, colipase, or bicarbonate secretion Pancreatic insufficiency (cystic fibrosis; Shwachman syndrome; Johanson-Blizzard syndrome; Pearson syndrome) Fecal elastase <200 μg/g; sweat chloride >70 mEq/L; neutropenia; sideroblastic anemia Sweat chloride test; genetic testing
Solubilization Deficiency of bile salts Cholestasis (biliary atresia; TPN cholestasis; Alagille syndrome; PFIC); terminal ileal resection; small-bowel bacterial overgrowth ↑ direct bilirubin; ↑ serum bile acids; positive H₂ breath test Liver function tests; hydrogen breath test
Mucosal cell Enterocyte enteropathy; lipoprotein deficiency Celiac disease; tropical sprue; giardiasis; abetalipoproteinemia; Anderson disease; post-Fontan enteropathy Villous atrophy on biopsy; Giardia on biopsy; ↓ plasma LDL and apoB; lipid-laden enterocytes; ↑ fecal α₁-antitrypsin Serology and biopsy; stool antigen; genetic testing
Chylomicron transport Lymphatic obstruction or malformation Hennekam syndrome; post-Fontan enteropathy; post-small-bowel resection chylous ascites Lymphedema; lymphangiectasia; mental retardation; ↑ fecal α₁-antitrypsin; transient chylous ascites Genetic testing; lymphangiography; ascitic fluid analysis

Carbohydrate Digestion and Absorption

A. Overview of Dietary Carbohydrates

B. Intraluminal Digestion

C. Brush-Border Digestion

D. Absorption

E. Enterocyte Monosaccharide Transport

Summary Table

Stage Location Key Enzymes/Transporters Substrates Products/Mechanism
Oral Buccal cavity Salivary α-amylase Starch Dextrins, maltose
Gastric Stomach None (amylase inactivated) N/A N/A
Pancreatic Duodenum Pancreatic α-amylase Starch, glycogen Maltose, maltotriose, α-limit dextrins
Brush-border Jejunum Lactase; sucrase-isomaltase; maltase-glucoamylase; trehalase Lactose; sucrose; maltose; α-limit dextrins; trehalose Glucose; galactose; fructose
Apical Transport Jejunum SGLT1; GLUT5 Monosaccharides Active cotransport; facilitated diffusion
Basolateral Exit Jejunum GLUT2; GLUT5 Glucose; galactose; fructose Facilitated diffusion to portal blood
Colonic Fermentation Colon Microbial glycosidases Dietary fiber; resistant starch Short-chain fatty acids (acetate, propionate, butyrate)

Protein Digestion and Absorption

A. Overview

B. Resistant Proteins and Markers of Loss

C. Intraluminal Digestion

D. Brush-Border Peptidases

E. Absorption of Amino Acids and Peptides

F. Basolateral Exit and Portal Delivery

G. Summary Table

Step Location Enzymes / Transporters Substrate Products
Gastric Hydrolysis Stomach Pepsin Proteins Peptides
Pancreatic Hydrolysis Duodenum Trypsin, Chymotrypsin, Elastase, Carboxypeptidases Peptides Amino acids, Di-/Tripeptides
Brush-Border Digestion Jejunum Surface Aminopeptidase N; Dipeptidyl Peptidase IV Oligopeptides Free AAs, Di-/Tripeptides
Peptide Absorption Enterocyte BBM PEPT1 (H+ cotransporter) Di-/Tripeptides Peptides in cytosol → Free AAs
Amino Acid Absorption Enterocyte BBM & BLM B0AT1; y+LAT1; EAATs; Na+/K+-ATPase Free AAs Portal amino acids

Neonatal Intestinal Physiology: Digestion, Absorption, and Vitamin Transport

A. Overview of Neonatal Digestion

B. Lipid Digestion in Neonates

C. Carbohydrate Digestion in Neonates

D. Protein Digestion in Neonates

E. Water-Soluble Vitamin Transport Mechanisms

Vitamin Transport Mechanism
Ascorbic acid (C) Active Na⁺-dependent uptake via SVCT1 on BBM; SVCT2 on basolateral membrane
Folic acid Folate conjugase hydrolyzes polyglutamates at BBM; proton-coupled folate transporter (PCFT) mediates uptake
Cobalamin (B₁₂) Released from R protein by pancreatic enzymes; binds intrinsic factor; absorbed in ileum via cubam receptor
Thiamine (B₁) pH-dependent active transport via THTR-1/THTR-2; electron-neutral carrier–mediated
Riboflavin (B₂) Hydrolysis and phosphorylation; Na⁺-independent carrier–mediated uptake on BBM
Niacin (B₃) Acidic pH–dependent carrier transport (not Na⁺-linked)
Pantothenic acid (B₅) pH-dependent carrier–mediated uptake (not Na⁺-linked)
Biotin (B₇) Carrier-mediated Na⁺-dependent transport via SMVT
Pyridoxine (B₆) Simple diffusion

F. Intestinal Conservation and Barrier Maturation